faculty

Roger Bumgarner

rogerb@uw.edu
Associate Professor

University of Washington

Microbiology

Gene Expression, Cell Cycle & Chromosome Biology

Microbiology, Infection & Immunity

Faculty Contact Information

Building: Rosen Building, South Lake Union Room: Room 262B Box: 358070 Phone: 206-732-6137 https://microbiology.washington.edu/users/roger-e-bumgarner

Research Summary

A fundamental issue facing modern biology is the development of methods and tools to convert genomics and function genomics data into mechanistic understanding. Genome sequences and computational methods have provided us with tools to identify and annotate genes and other functional sequences with varying degrees of accuracy. Annotated sequence information in turn enables tools such as RNA-Seq, microarrays, 2-D gels, protein mass spectrometry and yeast 2-hybrids to measure RNA and protein levels and physical interactions on genome-wide or near genome-wide scales.

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&query_key=1&WebEnv=MCID_63915fe70ea905750678bc1b&retmode=json
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Publications

The following publications were retrieved from PubMed:

What do positive and negative Cutibacterium culture results in periprosthetic shoulder infection mean? A multi-institutional control study.

American Shoulder and Elbow Surgeons (ASES) Periprosthetic Joint Infection (PJI) Multicenter Group,, Hsu JE, Bumgarner RE, Bourassa LA, Budge MD, Duquin TR, Garrigues GE, Green A, Iannotti JP, Khazzam MS, Koh JL, Matsen FA 3rd, Namdari S, Nicholson TA, Richter SS, Sabesan VJ, Virk MS, Whitson AJ, Yian EH, Ricchetti ET.

J Shoulder Elbow Surg. 2022 Aug; 8(31)1713-1720

Bacterial cyclic diguanylate signaling networks sense temperature.

Almblad H, Randall TE, Liu F, Leblanc K, Groves RA, Kittichotirat W, Winsor GL, Fournier N, Au E, Groizeleau J, Rich JD, Lou Y, Granton E, Jennings LK, Singletary LA, Winstone TML, Good NM, Bumgarner RE, Hynes MF, Singh M, Stietz MS, Brinkman FSL, Kumar A, Brassinga AKC, Parsek MR, Tseng BS, Lewis IA, Yipp BG, MacCallum JL, Harrison JJ.

Nat Commun. 2021 Mar 31; 1(12)1986

Cutibacterium subtype distribution on the skin of primary and revision shoulder arthroplasty patients.

Hsu JE, Matsen FA 3rd, Whitson AJ, Bumgarner RE.

J Shoulder Elbow Surg. 2020 Oct; 10(29)2051-2055

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