faculty

Ram Savan

savanram@uw.edu
Associate Professor

University of Washington

Gene Expression, Cell Cycle & Chromosome Biology

Genetics, Genomics & Evolution

Microbiology, Infection & Immunity

Genetic variation affecting antiviral responses.

Faculty Contact Information

Building: SLU E Room: 307 Box: 358059 Phone: 206-221-5141

Research Summary

​We study human genetic variations and gene-regulatory mechanisms to understand the heterogeneity in immune responses against viral infections in humans. Our main interest is to identify functional variants found in the coding and non-coding regions that determine susceptibility or resistance to life-threatening viral infections including hepatitis c virus, human immunodeficiency virus West Nile virus, ZIKA, influenza, and SARS-CoV-2. We use human-genetics, biochemical and molecular biology approaches to investigate how such genetic variations can affect immune response.

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&query_key=1&WebEnv=MCID_60ff68b3b47aac056e711fb0&retmode=json
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["sorttitle"]=> string(88) "isolation and characterization of a novel cxc chemokine in common carp cyprinus carpio l" ["volume"]=> string(2) "39" ["issue"]=> string(2) "13" ["pages"]=> string(6) "829-34" ["lang"]=> array(1) { [0]=> string(3) "eng" } ["nlmuniqueid"]=> string(7) "7905289" ["issn"]=> string(9) "0161-5890" ["essn"]=> string(9) "1872-9142" ["pubtype"]=> array(1) { [0]=> string(15) "Journal Article" } ["recordstatus"]=> string(28) "PubMed - indexed for MEDLINE" ["pubstatus"]=> string(1) "4" ["articleids"]=> array(5) { [0]=> array(3) { ["idtype"]=> string(6) "pubmed" ["idtypen"]=> int(1) ["value"]=> string(8) "12617998" } [1]=> array(3) { ["idtype"]=> string(3) "pii" ["idtypen"]=> int(4) ["value"]=> string(17) "S0161589002002572" } [2]=> array(3) { ["idtype"]=> string(3) "doi" ["idtypen"]=> int(3) ["value"]=> string(29) "10.1016/s0161-5890(02)00257-2" } [3]=> array(3) { ["idtype"]=> string(3) "rid" ["idtypen"]=> int(8) ["value"]=> string(8) "12617998" } [4]=> array(3) { ["idtype"]=> string(3) "eid" ["idtypen"]=> int(8) ["value"]=> string(8) "12617998" } } ["history"]=> array(3) { [0]=> array(2) { ["pubstatus"]=> string(6) "pubmed" ["date"]=> string(16) "2003/03/06 04:00" } [1]=> array(2) { ["pubstatus"]=> string(7) "medline" ["date"]=> string(16) "2003/04/30 05:00" } [2]=> array(2) { ["pubstatus"]=> string(6) "entrez" ["date"]=> string(16) "2003/03/06 04:00" } } ["references"]=> array(0) { } ["attributes"]=> array(1) { [0]=> string(12) "Has Abstract" } ["pmcrefcount"]=> int(1) ["fulljournalname"]=> string(20) "Molecular immunology" ["elocationid"]=> string(0) "" ["doctype"]=> string(8) "citation" ["srccontriblist"]=> array(0) { } ["booktitle"]=> string(0) "" ["medium"]=> string(0) "" ["edition"]=> string(0) "" ["publisherlocation"]=> string(0) "" ["publishername"]=> string(0) "" ["srcdate"]=> string(0) "" ["reportnumber"]=> string(0) "" ["availablefromurl"]=> string(0) "" ["locationlabel"]=> string(0) "" ["doccontriblist"]=> array(0) { } ["docdate"]=> string(0) "" ["bookname"]=> string(0) "" ["chapter"]=> string(0) "" ["sortpubdate"]=> string(16) "2003/03/01 00:00" ["sortfirstauthor"]=> string(7) "Savan R" ["vernaculartitle"]=> string(0) "" } [12547626]=> array(43) { ["uid"]=> string(8) "12547626" ["pubdate"]=> string(8) "2003 Jan" ["epubdate"]=> string(0) "" ["source"]=> string(22) "Fish Shellfish Immunol" ["authors"]=> array(4) { [0]=> array(3) { ["name"]=> string(9) "Okamoto K" ["authtype"]=> string(6) "Author" ["clusterid"]=> string(0) "" } [1]=> array(3) { ["name"]=> string(9) "Ikemura H" ["authtype"]=> string(6) "Author" ["clusterid"]=> string(0) "" } [2]=> array(3) { ["name"]=> string(7) "Savan R" ["authtype"]=> string(6) "Author" ["clusterid"]=> string(0) "" } [3]=> array(3) { ["name"]=> string(7) "Sakai M" ["authtype"]=> string(6) "Author" ["clusterid"]=> string(0) "" } } ["lastauthor"]=> string(7) "Sakai M" ["title"]=> string(128) "Cloning, sequence and variability analysis of expressed immunoglobulin light chain genes from yellowtail Seriola quinqueradiata." ["sorttitle"]=> string(126) "cloning sequence and variability analysis of expressed immunoglobulin light chain genes from yellowtail seriola quinqueradiata" ["volume"]=> string(2) "14" ["issue"]=> string(1) "1" ["pages"]=> string(5) "55-70" ["lang"]=> array(1) { [0]=> string(3) "eng" } ["nlmuniqueid"]=> string(7) "9505220" ["issn"]=> string(9) "1050-4648" ["essn"]=> string(9) "1095-9947" ["pubtype"]=> array(1) { [0]=> string(15) "Journal Article" } ["recordstatus"]=> string(28) "PubMed - indexed for MEDLINE" ["pubstatus"]=> string(1) "4" ["articleids"]=> array(5) { [0]=> array(3) { ["idtype"]=> string(6) "pubmed" ["idtypen"]=> int(1) ["value"]=> string(8) "12547626" } [1]=> array(3) { ["idtype"]=> string(3) "pii" ["idtypen"]=> int(4) ["value"]=> string(17) "S1050464802904171" } [2]=> array(3) { ["idtype"]=> string(3) "doi" ["idtypen"]=> int(3) ["value"]=> string(22) "10.1006/fsim.2002.0417" } [3]=> array(3) { ["idtype"]=> string(3) "rid" ["idtypen"]=> int(8) ["value"]=> string(8) "12547626" } [4]=> array(3) { ["idtype"]=> string(3) "eid" ["idtypen"]=> int(8) ["value"]=> string(8) "12547626" } } ["history"]=> array(3) { [0]=> array(2) { ["pubstatus"]=> string(6) "pubmed" ["date"]=> string(16) "2003/01/28 04:00" } [1]=> array(2) { ["pubstatus"]=> string(7) "medline" ["date"]=> string(16) "2003/04/09 05:00" } [2]=> array(2) { ["pubstatus"]=> string(6) "entrez" ["date"]=> string(16) "2003/01/28 04:00" } } ["references"]=> array(0) { } ["attributes"]=> array(1) { [0]=> string(12) "Has Abstract" } ["pmcrefcount"]=> string(0) "" ["fulljournalname"]=> string(27) "Fish & shellfish immunology" ["elocationid"]=> string(0) "" ["doctype"]=> string(8) "citation" ["srccontriblist"]=> array(0) { } ["booktitle"]=> string(0) "" ["medium"]=> string(0) "" ["edition"]=> string(0) "" ["publisherlocation"]=> string(0) "" ["publishername"]=> string(0) "" ["srcdate"]=> string(0) "" ["reportnumber"]=> string(0) "" ["availablefromurl"]=> string(0) "" ["locationlabel"]=> string(0) "" ["doccontriblist"]=> array(0) { } ["docdate"]=> string(0) "" ["bookname"]=> string(0) "" ["chapter"]=> string(0) "" ["sortpubdate"]=> string(16) "2003/01/01 00:00" ["sortfirstauthor"]=> string(9) "Okamoto K" ["vernaculartitle"]=> string(0) "" } [11742760]=> array(43) { ["uid"]=> string(8) "11742760" ["pubdate"]=> string(8) "2002 Jan" ["epubdate"]=> string(0) "" ["source"]=> string(39) "Comp Biochem Physiol B Biochem Mol Biol" ["authors"]=> array(2) { [0]=> array(3) { ["name"]=> string(7) "Savan R" ["authtype"]=> string(6) "Author" ["clusterid"]=> string(0) "" } [1]=> array(3) { ["name"]=> string(7) "Sakai M" ["authtype"]=> string(6) "Author" ["clusterid"]=> string(0) "" } } ["lastauthor"]=> string(7) "Sakai M" ["title"]=> string(180) "Analysis of expressed sequence tags (EST) obtained from common carp, Cyprinus carpio L., head kidney cells after stimulation by two mitogens, lipopolysaccharide and concanavalin-A." 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Publications

The following publications were retrieved from PubMed:

The Experts Speak: A New Feature in the JICR.

Gale M Jr, Savan R, Garcia-Sastre A, Prokunina-Olsso L, Balamurugan K, Young HA.

J Interferon Cytokine Res. 2021 May; 5(41)161-163

IFNλ Therapy Prevents Severe Gastrointestinal Graft-versus-Host Disease.

Henden AS, Koyama M, Robb RJ, Forero A, Kuns RD, Chang K, Ensbey KS, Varelias A, Kazakoff SH, Waddell N, Clouston AD, Giri R, Begun J, Blazar BR, Degli-Esposti MA, Kotenko SV, Lane SW, Bowerman K, Savan R, Hugenholtz P, Gartlan KH, Hill GR.

Blood. 2021 May 5;

Germline SAMD9L truncation variants trigger global translational repression.

Allenspach EJ, Soveg F, Finn LS, So L, Gorman JA, Rosen ABI, Skoda-Smith S, Wheeler MM, Barrow KA, Rich LM, Debley JS, Bamshad MJ, Nickerson DA, Savan R, Torgerson TR, Rawlings DJ.

J Exp Med. 2021 May 3; 5(218)

A small sustained increase in NOD1 abundance promotes ligand-independent inflammatory and oncogene transcriptional responses.

Rommereim LM, Akhade AS, Dutta B, Hutcheon C, Lounsbury NW, Rostomily CC, Savan R, Fraser IDC, Germain RN, Subramanian N.

Sci Signal. 2020 Dec 8; 661(13)

Shear stress associated with cardiopulmonary bypass induces expression of inflammatory cytokines and necroptosis in monocytes.

Tu LN, Hsieh L, Kajimoto M, Charette K, Kibiryeva N, Forero A, Hampson S, Marshall JA, O'Brien J, Scatena M, Portman MA, Savan R, Benner C, Aliseda A, Nuri M, Bittel D, Pastuszko P, Nigam V.

JCI Insight. 2021 Jan 11; 1(6)

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