faculty

Liangcai Gu

gulc@uw.edu
Assistant Professor

University of Washington

Biochemistry

Computational Biology

Developmental Biology, Stem Cells & Aging

Genetics, Genomics & Evolution

Neuroscience

Protein sensors and spatial omics for aging, pain, and addiction

Faculty Contact Information

Building: Health Sciences Building Room: J579 Box: 357350 Phone: 206-221-0382 https://sites.uw.edu/biochemistry/faculty/liangcai-gu/

Research Summary

We develop and use integrated approaches for spatiotemporal, multimodal measure and control of complex living systems from molecules to tissues. We recently created protein-based sensors and actuators for chemical sensing and chemogenetic or optogenetic manipulation of cell behaviors in behaving animals. We developed polony gel (clonal DNA cluster array of ≤ 1-µm features)-based spatial barcoding and sequencing to spatially map single-cell transcriptomes and proteomes in morphologically intact tissues to study physiological, pathological, and pharmacological changes. Techniques frequently used in current projects include protein display and high-throughput screening, polony gel fabrication and sequencing, Pixel-seq, SMI-seq, mass spectrometry, and fluorescence imaging. We are applying new tools to study cellular senescence in tissues and brain mechanisms of chronic pain and addiction, to improve safety and efficacy of gene and cell therapies, and to guide the evolution of multi-enzyme machinery making high-value chemicals.

DEI Statement

The mission of our training and research is to educate new-generation of scientists—with diversity, equity, and inclusion as our core values—and to develop accessible transformative technologies to advance the understanding and treatment of aging, chronic pain, and drug addiction. Our laboratory aims to provide a highly inclusive environment to help trainees to thrive personally and academically.

Training Summary

More Alike Than Not: Intersectional Equity Training (School of Medicine DEI training) – 2021

Implicit Bias Training Course – 2021

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&query_key=1&WebEnv=MCID_63916370c2de296d5f704b18&retmode=json
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Publications

The following publications were retrieved from PubMed:

Polony gels enable amplifiable DNA stamping and spatial transcriptomics of chronic pain.

Fu X, Sun L, Dong R, Chen JY, Silakit R, Condon LF, Lin Y, Lin S, Palmiter RD, Gu L.

Cell. 2022 Nov 23; 24(185)4621-4633.e17

Defining molecular glues with a dual-nanobody cannabidiol sensor.

Cao S, Kang S, Mao H, Yao J, Gu L, Zheng N.

Nat Commun. 2022 Feb 10; 1(13)815

Synthetic nanobody-functionalized nanoparticles for accelerated development of rapid, accessible detection of viral antigens.

Chen X, Kang S, Ikbal MA, Zhao Z, Pan Y, Zuo J, Gu L, Wang C.

Biosens Bioelectron. 2022 Apr 15; (202)113971

Creating Red Light-Switchable Protein Dimerization Systems as Genetically Encoded Actuators with High Specificity.

Huang Z, Li Z, Zhang X, Kang S, Dong R, Sun L, Fu X, Vaisar D, Watanabe K, Gu L.

ACS Synth Biol. 2020 Dec 18; 12(9)3322-3333

Accepting Students For:

Rotation, Autumn
Rotation, Spring
Rotation, Summer
Rotation, Winter
Permanent

Lab Information

Location: University of Washington
Building: HSB
Room: J579
Phone: 206-221-7730
https://www.uwgulab.org/